Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI
1ZN2 Chain:A ((7-200))
---VFVVDDDMSVREGLRNLLRSAGFE-VETFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ------LNAERRQARETQDQLEQLFSSLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEKY---
General information:
TITO was launched using:
RESULT:
Template:
1ZN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111929 for 1402 contacts (-79.8/contact) +
2D Compatibility (PS) -21166 + (NN) -10422 + (LL) 1092
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -158925.0 ( -113.36 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN2-query.scw
PDB file :
Tito_Scwrl_1ZN2.pdb
: