Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHERLDWQVHPM-PSALYVLKGELRLETRDGAQSTRVLEGEAAGCLMNIIHR-LIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA
1V70 Chain:A ((25-103))
----------------------------------------------SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVR-VG-EEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPRP---------------
General information:
TITO was launched using:
RESULT:
Template:
1V70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30943 for 510 contacts (-60.7/contact) +
2D Compatibility (PS) -7919 + (NN) 2988 + (LL) 1924
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -35900.0 ( -70.39 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1V70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V70-query.scw
PDB file :
Tito_Scwrl_1V70.pdb
: