Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG
4M29 Chain:A ((131-169))
-----------------------------GPWRDLIDAFVHHLRARYGVEEVRTWF------FEVWNEPNLDGFWEKADQAAYF
General information:
TITO was launched using:
RESULT:
Template:
4M29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7608 for 149 contacts (-51.1/contact) +
2D Compatibility (PS) -4262 + (NN) -2332 + (LL) 2680
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -15722.0 ( -105.52 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_4M29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M29-query.scw
PDB file :
Tito_Scwrl_4M29.pdb
: