Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA |
| 1S29 Chain:A ((40-89)) | ----------------------------NAEGFVSLETLLTFKRVNSVTTDVKEVVEAIRPSE--KLVLSEDGLMVRRRDPLP--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9887 for 269 contacts (-36.8/contact) +
2D Compatibility (PS) -5303 + (NN) -2816 + (LL) 9200
1D Compatibility (HY) -800 + (ID) 450
Total energy: -10056.0 ( -37.38 by residue)
QMean score : 0.191
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