Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALL-VAANGRAGENISNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA |
2ZF8 Chain:A ((158-225)) | -----------------------------------------------------------------------------------------------------------------------------------------------------DIAFTILHYERQGDQ------LTKASKKRLSQIADYIRHNQDIDLVLVATY------SASQSLSERRAESLRDYFQSLGLPEDRIQVQGYGRVVISLGRTQ------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8989 for 296 contacts (30.4/contact) +
2D Compatibility (PS) -6664 + (NN) -1557 + (LL) 10844
1D Compatibility (HY) 400 + (ID) 350
Total energy: 11662.0 ( 39.40 by residue)
QMean score : 0.094
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