Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
2UGI Chain:A ((42-84))
-------------------------------------------------------LVHTAYDESTDENVMLLTSDAPEYKPWALVIQDSNGENKIKML----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2UGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11205 for 215 contacts (-52.1/contact) +
2D Compatibility (PS) -4635 + (NN) -1083 + (LL) 5704
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -15069.0 ( -70.09 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_2UGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UGI-query.scw
PDB file :
Tito_Scwrl_2UGI.pdb
: