Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDML--PWEIVSATVVHEPVEQALFLGARG---QVFCMG-SGDIHEEQLPDGD-DA--IGGRG----NMRGVA---CI-DGVAYACGMDRQVYRRFD-ENDWRAIDTGARPPAG-------SEAVVGFEAIG--GFGAREIYAVGWDGEIWQYD--GKRWQPRESPTN------------LILTAICCAE--DGSVYACGQAGTLLRGR--NDHWEIIAQDDVD---EDLWSLAWF---DGALYVSS--------------ATAVYTLVG--GHLKEVDFGDEQPQ-------RCFHLS-AADGVLWSIA-AKDIF-SFD-GQQWTRID |
| 3B7F Chain:A ((42-378)) | ---------------------------------------------RRTWELR----GPVFLGHTIHHIVQDPREPERMLMAART-LGPTVFRSDDGGGNWTE-ATRPPAFNKAP---GRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGE-PDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASADEGEHWQCIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124188 for 1858 contacts (-66.8/contact) +
2D Compatibility (PS) -27138 + (NN) -10365 + (LL) 3316
1D Compatibility (HY) -800 + (ID) 2050
Total energy: -161225.0 ( -86.77 by residue)
QMean score : 0.226
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