Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPADTSKP--NYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
1XZO Chain:A ((8-147))
----------------------------------------------PLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-NIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL
General information:
TITO was launched using:
RESULT:
Template:
1XZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51092 for 1017 contacts (-50.2/contact) +
2D Compatibility (PS) -15073 + (NN) -8665 + (LL) 5364
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -80516.0 ( -79.17 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_1XZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZO-query.scw
PDB file :
Tito_Scwrl_1XZO.pdb
: