Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
3IDU Chain:A ((14-84))
----------------------------FEFPDLTVE-IKGPDVVGVNKLAEYEVHVKNLGGIG--VPSTKVRVYINGTLYKNWT----VSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVV-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IDU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26354 for 398 contacts (-66.2/contact) +
2D Compatibility (PS) -7578 + (NN) -3200 + (LL) 3508
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -36824.0 ( -92.52 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_3IDU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IDU-query.scw
PDB file :
Tito_Scwrl_3IDU.pdb
: