Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
2NW6 Chain:A ((220-272))
-----------------------------VFGVTGATDTSTIPL-------VDPANALDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLK
General information:
TITO was launched using:
RESULT:
Template:
2NW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4456 for 305 contacts (14.6/contact) +
2D Compatibility (PS) -5152 + (NN) -1877 + (LL) 2976
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -2897.0 ( -9.50 by residue)
QMean score : 0.065
(partial model without unconserved sides chains):
PDB file :
Tito_2NW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NW6-query.scw
PDB file :
Tito_Scwrl_2NW6.pdb
: