Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIASFGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWSAERTERLSARVMPKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALV---REREGFR |
1HDJ Chain:A ((2-63)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAE--------EKFKEIAEAYDVLSDPRKREIFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17357 for 363 contacts (-47.8/contact) +
2D Compatibility (PS) -6405 + (NN) -3319 + (LL) 16372
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -13509.0 ( -37.21 by residue)
QMean score : 0.821
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