Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGS--SIYLACEAIYNRAQAVIVAVGVETAETPEA---------------------------------------------------------------------------QASAVIGGISA----AGERTGLQALLDGKSRFNAQPRLLVAPGHSAQQAVATAMDGLAEKLR------AIAILDGPNSTDEAAVAYAKNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNKEIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRD---DGYRLWGNRTLS------SDSKWAFVTRVRTMDLVMDAILAGHKWAVD--------RGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADP--DLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA |
| 3LML Chain:A ((16-455)) | ----PGIYTNFKAAAAERTKAGERGTVALPLAASWG-----AAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLK-LAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGE------YFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIIN----VRN---GVTLRDGTILE-------PHQVVAWVAGADASA----SMLKSNTFVKYDGAIDATPRLAN------DEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNN----NVDGFIVNQSIEPVDSGEKFYFTTEVKLEH-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95072 for 2595 contacts (-36.6/contact) +
2D Compatibility (PS) -35025 + (NN) -5321 + (LL) 3896
1D Compatibility (HY) 10400 + (ID) 1600
Total energy: -122722.0 ( -47.29 by residue)
QMean score : 0.258
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