Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLVKSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFPGLASRARDDAARADLADLGHPVPEGDQSVREADLSLAEALGWLFVSEGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
1J77 Chain:A ((8-192))
----------ALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDK--ELPYEAGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALNLTPEAEAEAIQGAREAFAFYKVVLRETFG
General information:
TITO was launched using:
RESULT:
Template:
1J77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43109 for 1434 contacts (-30.1/contact) +
2D Compatibility (PS) -20513 + (NN) -15700 + (LL) 756
1D Compatibility (HY) -12000 + (ID) 3400
Total energy: -93966.0 ( -65.53 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1J77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J77-query.scw
PDB file :
Tito_Scwrl_1J77.pdb
: