Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
1R8O Chain:B ((100-121))
--------------PSVTVGNPKVSVFGGPFKIEEG---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 904 for 56 contacts (16.1/contact) +
2D Compatibility (PS) -2494 + (NN) -2940 + (LL) 1716
1D Compatibility (HY) 0 + (ID) 200
Total energy: -3014.0 ( -53.82 by residue)
QMean score : -0.093
(partial model without unconserved sides chains):
PDB file :
Tito_1R8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R8O-query.scw
PDB file :
Tito_Scwrl_1R8O.pdb
: