Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
5D7Z Chain:A ((24-148))
-RMLHAVYRVGDLDRTIKYYTECFGMKLLRKRDVPDEKYTNAFLGFGPENTNFAVELTYNYGVDKYDIGTGFGHFAIANDDVYKLAENIKSKGGKITREPGPVKGGSTVIAFAQDPDGYMFELIQRADTPE
General information:
TITO was launched using:
RESULT:
Template:
5D7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64277 for 882 contacts (-72.9/contact) +
2D Compatibility (PS) -13439 + (NN) -5613 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -96221.0 ( -109.09 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_5D7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5D7Z-query.scw
PDB file :
Tito_Scwrl_5D7Z.pdb
: