Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQCSGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALYRKPEEVNRPC |
| 3IL9 Chain:A ((5-316)) | -----IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAA-AGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGT--IIIFGDGAGAAVLAASE--EPGIISTHLHADGSYGELLTLPNADRVNP----ENSIH-----LTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277083 for 2878 contacts (-96.3/contact) +
2D Compatibility (PS) -33059 + (NN) -12172 + (LL) 500
1D Compatibility (HY) -18400 + (ID) 6350
Total energy: -346564.0 ( -120.42 by residue)
QMean score : 0.524
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