Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYRQPGASQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERSGSGLLPYSTSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPGSDRFDFAGGTYRWSERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEGGSR---VNNRALNALFTYRL-GGHAFGLGYQRMSGDSGFAYLAGTDPYLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNGTFRSDFGNDIDETRLIVSYALPLW |
4FSP Chain:A ((19-408)) | -----------------------FLEDSRASLALRNFYMNRDFR-------KSEEWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVRLD-----------------------YARLDATAKLRLSRSELKVGGLVPKLPTIQPNYGRLFPQVFQGALLTSGELSGLSLNLGRLTEVS-------SDLALFNRNRRFAGAAQ---ADRFDLAGLDYRIAPDWTGSYHYGELEQVYAQHFLGLKGRIGIAAD-SLESDLRLALSRDTGGARGGRIDNRSFSGSLTYRLRNGQAFGLGYQRMSGDHGFPYLEGTDPYLVNFGQYNDFAEAGESSWQLRYDCDFAPLGVPGLSLMTRYFSG-HGAKPKGADGSREWERDSDLRYVLQGGALKGLGLVWRNATYRSAFSRDIDENRLYLTYELPLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FSP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16628 for 2775 contacts (-6.0/contact) +
2D Compatibility (PS) -35578 + (NN) 641 + (LL) 2704
1D Compatibility (HY) -37600 + (ID) 9850
Total energy: -96311.0 ( -34.71 by residue)
QMean score : 0.246
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