Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG |
4Q5F Chain:D ((96-119)) | ---------------EEAQVDSIFDQFKDFMAELRPCFRVLAGFEEGDKEKVLKEVAVPARDKHLPLLEKFLAKSGSEYMVGKSVTWADLVITDSLASWESLIPDFLSGHLQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 533 for 89 contacts (6.0/contact) +
2D Compatibility (PS) -2634 + (NN) -2936 + (LL) 724
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -7213.0 ( -81.04 by residue)
QMean score : 0.350
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