Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQKRILVTGAGSGFGREVALRLAA---RGHRTIAGVRGAGQAADLREEAGRRGVP---LRVETLDI----TVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALFETNVFANLELTQGFVRRMVEQKRG-GKVLFVSSIAGLITGPYTGPYCASKHALEAFAEALHAELKPFGIQVGTINPGPYQTGFNDRMM-----------ETWKRWYDPQRHFTDHSGVRFPFEQYDPEEMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL |
1QYW Chain:A ((5-264)) | -----VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT-------SPEEVLDRTDIHTFHRFY----QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95000 for 1840 contacts (-51.6/contact) +
2D Compatibility (PS) -24774 + (NN) -11712 + (LL) 1176
1D Compatibility (HY) -20000 + (ID) 3900
Total energy: -154210.0 ( -83.81 by residue)
QMean score : 0.499
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