Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQSTRKLLAGLALAVSAGLVQAAPEVRIYNWFDYIAPDTLKNFQAQTGIAPKYDVYDSNEVLEAKLLSGHSGYDLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGKDPGNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPNSHQPEDYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAKNVEQAHAFLDYLLRPEVVAPISDYVAYANPNKAADGLISAELRDNPNVYPPEEVQARLYSVEMLPPKLERLRTRTWSKIKTGK |
4GL0 Chain:A ((13-299)) | -------------------------LTIYNWGDYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL--SFDDDNKYSMPYFWGTLGIIYNKEMFP-----DKNFDTWNALFDPE-----LKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN-AGVAVTFSGEAAEMLSENED------LEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKMYR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141811 for 2386 contacts (-59.4/contact) +
2D Compatibility (PS) -30249 + (NN) -14079 + (LL) 3600
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -208939.0 ( -87.57 by residue)
QMean score : 0.578
|
|
|