Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAELGIFNGHLLQHLLAALWFLFCWVGYTRYATWKGRDTACLASVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFASSTLIILAGILTLLGSTDRAVSVLADLPFVEEASRGLSELKLLCLAVVFVYAFFTFSWCMRQYNFAAILVGSAPMIGERNVGELERKSFAERAARVISLAANQFNFGLRSYYFGLAMLAWFINSWFFMLVTAGVVLVLYRREFHSDVLEVMVYTETAIAESPREGEGEVPRG |
2M20 Chain:A ((7-29)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGLVGALLLLLVVALGIGLFIRRRHIVRKRTLRRLLQERELVEPLTPSGEKLWS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2M20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6520 for 90 contacts (-72.4/contact) +
2D Compatibility (PS) -2282 + (NN) -1569 + (LL) 17776
1D Compatibility (HY) -3600 + (ID) 250
Total energy: 3555.0 ( 39.50 by residue)
QMean score : -0.214
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