Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLWRQTPDLEQLNASQKNSIGDLLGIRFEAFDDESLTASMPVDSRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVGLEVNANHLRGLRSGRVTAVARAIHLGRTTHVWDIRLSGDDGKPSCIARLTMAVVPLAGRAG
4K4A Chain:A ((2-136))
--IWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV-VGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL-------
General information:
TITO was launched using:
RESULT:
Template:
4K4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87980 for 1039 contacts (-84.7/contact) +
2D Compatibility (PS) -13975 + (NN) -1822 + (LL) 316
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -121411.0 ( -116.85 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4K4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K4A-query.scw
PDB file :
Tito_Scwrl_4K4A.pdb
: