Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPVLPLLLSLSLCAPALADWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
2XU8 Chain:B ((1-116))
-------------------DWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
General information:
TITO was launched using:
RESULT:
Template:
2XU8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42374 for 692 contacts (-61.2/contact) +
2D Compatibility (PS) -12784 + (NN) -7880 + (LL) 1744
1D Compatibility (HY) -14400 + (ID) 5800
Total energy: -81494.0 ( -117.77 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2XU8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XU8-query.scw
PDB file :
Tito_Scwrl_2XU8.pdb
: