Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAGR----RLAGLENGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGRQQQTFLLQLLGAVEHAPGGEYLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES |
3WOQ Chain:A ((443-495)) | ----------------------LPADQRVAAVDAWLGGNDAAAVKRALDRLAGTKLGSTEER-LKWFAADRKAFEASNDPAIQYAVAVMPTLLKLEQERKTRAGENLAARPVYLQALADYKKSQGEFVYPDANLSLRITFGNVMGYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5565 for 187 contacts (29.8/contact) +
2D Compatibility (PS) -5482 + (NN) -5239 + (LL) 824
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -6632.0 ( -35.47 by residue)
QMean score : 0.251
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