Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
1V54 Chain:G ((10-35)) | ---------------------------GTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5513 for 103 contacts (-53.5/contact) +
2D Compatibility (PS) -2496 + (NN) 696 + (LL) 18272
1D Compatibility (HY) -800 + (ID) 250
Total energy: 9909.0 ( 96.20 by residue)
QMean score : -0.140
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