Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWTKPSFTDLRLGFEVTLYFANR
2GPI Chain:A ((29-38))
------------GMVIDCYIGQK
General information:
TITO was launched using:
RESULT:
Template:
2GPI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 17 contacts (0.0/contact) +
2D Compatibility (PS) -1254 + (NN) -566 + (LL) 872
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -3048.0 ( -179.29 by residue)
QMean score : 0.122
(partial model without unconserved sides chains):
PDB file :
Tito_2GPI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPI-query.scw
PDB file :
Tito_Scwrl_2GPI.pdb
: