Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MSVIIALAALGLLMLAAYRG----------YSVILFAPLAALGA--------VLLTDPSAVAPTF--TGVFMEKMVGFIKLYFPVFLLGAVFGKLIEL-AGFSRSIVAAAIRLLGTRQAMLVIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQSDIPKRLIPATIALGAFSFTMDAL-PGTPQIQNI--IPSTFFGTHAWAAPWLGTLGALFVFAVGMLYLRRQANKARRN--GEGYGSDLRNEP-ETADDLRLPNPWLALSPLV------LVGV---ANLLFTHWIPQWYGQVHTLQLAGMATPLQTEVGKLTAIW-----------AVQAALLLGILLVLASGFAAIRSRLAEGTRSAVAGSLLAAMNTASEYGFGAVIASLPGFLVLADALKSIPNPLVNEAITVTLLAGITGSASGGMSIALAAMSDTFIAAANAAQIPLEVLHRVAAMASGGMDTLPHNGAVITLLAV--TGLTHREAYKVIF-GITLIKTLA--VFF--VIGLFYATGLV---- |
| 4TR2 Chain:A ((54-627)) | DDVHKIISELRFLQKVETILESSNMSVSDVEADANAYNPDRDAPKEELQKLQDKKSLRLIVSENHATSPSFFEESLLQEDVVSFIQSKGKLSNLKNLKSMIIDLNSDMTDEELAEYISLLERKGALIESDK--------------LVGADYKFNDEY--------RNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHP-------DLRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCISRQAHMINGSFSFDEYSNIFNASVEHLRSLGILFFVSASNCA---------HDKLSKPDIAKCDLAVNHRYPPILSKTHNNVIAVANLKR----DLDESYSLS-----VNSFYSNIYCQLAAPGTNIYSTT-----PMNNYRKL----NGTSMASPHVAAIASIVRSINPNLTYLQIVEILRNAIVKLPSLTERVSWGGYVDILRAVNLAIDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -430893 for 3537 contacts (-121.8/contact) +
2D Compatibility (PS) -43001 + (NN) -3854 + (LL) 4272
1D Compatibility (HY) -18400 + (ID) 3800
Total energy: -495676.0 ( -140.14 by residue)
QMean score : 0.228
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