Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGEWKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFEREPLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
| 3BAZ Chain:A ((78-328)) | -------------------------------------------------------DAELIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWK--FGDFKLTTKFSGKRVGIIGLGRIGLAVAERA-EAFDCPISYFSRSKKPNTNYTY---YGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEK-LFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSG-KPL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157549 for 1990 contacts (-79.2/contact) +
2D Compatibility (PS) -27506 + (NN) -13066 + (LL) 5920
1D Compatibility (HY) -26400 + (ID) 5550
Total energy: -224151.0 ( -112.64 by residue)
QMean score : 0.457
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