Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCPCPHSQAQGETDGEAEWHNAALDFTHAMSYGDYLKLDKVLDAQFPLS-----PDHNEMLFIIQHQTSELWMKLMLHELRAAR-----EHVKSGKLGPALKMLARVSRIFDQLVHAWAVLATMTPTEYNTIRPYLGQSSGFQSYQYREIEFILGNKNATLLKPHAHRAELLA------ALEQALHTPSLYDEAIR-LMAAQGLPVS--------QERLAR--DAAAGTCYEASVEAA----------WRQVYQA----------------------------------PERYWDLYQLAEKLIDLEDSFRQWRFRHVTTVERIIGFKP-GTGGTEGVGYLRSMLDTILFPELWRLRSNL |
| 4HKA Chain:A ((6-319)) | -------------------------------YGEYLMLDKLLDAQCMLSEEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQFRLIENKLGVLTEQRVRYNQKYSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLEESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRSIFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNHVIMVQRMIGSQQLGTGGSSGYQYLRSTL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72927 for 1460 contacts (-50.0/contact) +
2D Compatibility (PS) -26708 + (NN) -17579 + (LL) 2816
1D Compatibility (HY) -20000 + (ID) 4900
Total energy: -139298.0 ( -95.41 by residue)
QMean score : 0.393
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