Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFYEPDVQRMAAPLGELFAAVG--------------VRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGIDAA----FDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGA-SMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 4H4Y Chain:A ((6-276)) | LKAPVVVLGAGLASV-SFVAELRQAGYQGL----ITVVGDEAE---RP-YDRP-------PLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGR----TLPYGTLVLATGAA---PRALPTLQGATMPVHTLRTLEDARRIQAGLRP---------QSRLLIVGGGVIGLELAAT---------ARTAGVHVSLVARGPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTT-CPDVYALGDVTR----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154048 for 1983 contacts (-77.7/contact) +
2D Compatibility (PS) -26559 + (NN) -1802 + (LL) 10748
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -194461.0 ( -98.06 by residue)
QMean score : 0.472
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