Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQQAVQRAGEQRQRQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWRLEQDQRRLDSERRQLENRRRQSQSPAIR
1NL3 Chain:A ((609-689))
-------------------------PDDVPIEAKMVTRAIKSAQTQVEQQN--FEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQALDMVR------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21314 for 273 contacts (78.1/contact) +
2D Compatibility (PS) -8448 + (NN) -5200 + (LL) 4620
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 8586.0 ( 31.45 by residue)
QMean score : 0.842
(partial model without unconserved sides chains):
PDB file :
Tito_1NL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NL3-query.scw
PDB file :
Tito_Scwrl_1NL3.pdb
: