Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ
3NY7 Chain:B ((2-77))
-STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ-
General information:
TITO was launched using:
RESULT:
Template:
3NY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37928 for 519 contacts (-73.1/contact) +
2D Compatibility (PS) -8244 + (NN) -3283 + (LL) 328
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -61277.0 ( -118.07 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_3NY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NY7-query.scw
PDB file :
Tito_Scwrl_3NY7.pdb
: