Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLELQEHCSLKPYNTFGIDVRARLLAHARDEADVREALALARERGLPLLVIGGGSNLLLTRD--VEALVLRMASQGRRIVSDAADSVLVEAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQACRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPVRQRLEEEGIASPTARDVSRVICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNLY |
3TX1 Chain:A ((35-314)) | IAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEA--QEVVAYCHQNKIPLTILGNGSNLII-KDGGIRGVILHL----DLLQTIERNNTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVL-TQTGELKKLKRSELK--YR-STIAEK--NYIVLDATFSLALEEK-----NLIQAKMDE--------------LTAAREAK--QPLEYPSCGSVFKRP-----------------------PGHF---AGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138693 for 2312 contacts (-60.0/contact) +
2D Compatibility (PS) -29420 + (NN) -9770 + (LL) 3316
1D Compatibility (HY) -16800 + (ID) 4300
Total energy: -195667.0 ( -84.63 by residue)
QMean score : 0.410
|
|
|