Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIR--AIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPF-ARL-AGQLDALMPAHVIYPQVDPQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRASAELALAALQRLKVTPPSRLQRMRGKGYANTDYRQQPRWLEALSALRAAQLID |
| 3GS6 Chain:A ((2-322)) | --GPLWLDVAGYELSAEDRAILAHPTVGGVILFGRNYHDNQQLLALNKAIRQAAARP-ILIGVDQEGGRVQRFREGFSRIPPAQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAI-GNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVI---HLETPYDER---ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSM----VMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEV--PQAEALLKKQQFSYSELKRLERWQQASANMQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167728 for 2772 contacts (-60.5/contact) +
2D Compatibility (PS) -33230 + (NN) -12831 + (LL) 1520
1D Compatibility (HY) -25200 + (ID) 7650
Total energy: -245119.0 ( -88.43 by residue)
QMean score : 0.456
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