Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAVPMLAIDGPSGAGKGTVAGLLARRLGWNLLDSGALYRLLAFAAVNHGVDLTNEEALKVLAAHLDVQFVAADGSHGQRIILEGEEVTDVIRTEQVGAGASQVAALPAVRDALLQRQRAFREAPGLVADGRDMGTVVFPDAPLKIFLTASAEERARRRYLQLKAKGADVDQSALLEEIRERDERDSQRAVAPLKPADDAILLDSTEMSIEAVVETIIRHCERQGWDV
2FEO Chain:A ((3-223))
--AIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGN--LEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQK----
General information:
TITO was launched using:
RESULT:
Template:
2FEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127252 for 1777 contacts (-71.6/contact) +
2D Compatibility (PS) -23780 + (NN) -13543 + (LL) 100
1D Compatibility (HY) -22400 + (ID) 6700
Total energy: -193575.0 ( -108.93 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2FEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEO-query.scw
PDB file :
Tito_Scwrl_2FEO.pdb
: