Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGH-SAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
1TIK Chain:A ((3-194))
LSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR-PSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAK---------------------
General information:
TITO was launched using:
RESULT:
Template:
1TIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110379 for 1448 contacts (-76.2/contact) +
2D Compatibility (PS) -20967 + (NN) -10349 + (LL) 1756
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -162189.0 ( -112.01 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1TIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIK-query.scw
PDB file :
Tito_Scwrl_1TIK.pdb
: