Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWFRNLLVYRLTQDLQLDADSLEKALGEKSARPCASQELTTYGFTAPFGKGPDAPLVHVSQDFFLISARKEERILPGSVVRDALKEKVDEIEAQQMRKVYKKERDQLKDEIVQTLLPRAFIRRSST-FAA-IAPSLGLILVDSASAKKAEDLLSTLREALGSLPVRPLSVKVAPTATLTDWVKTQEAAGDFHVLDECELRDTHEDGGVVRCKRQDLTSEEIQLHLTAGKLVTQLSLAWSDKLSFVLDDKLAVKRLRFEDLLQEQAEKDGGEDALGQLDASFTLMMLTFAEFLPALFEALGGEEIPQGV |
| 3LPE Chain:A ((24-75)) | -------------------------------------------------------------------------------------------------------------NIAGLMASRAEKEQLDVYSILASESLKGYVLVEAETKGDVEELIKGMPRVRG--------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19264 for 271 contacts (-71.1/contact) +
2D Compatibility (PS) -5452 + (NN) -1747 + (LL) 19036
1D Compatibility (HY) -400 + (ID) 450
Total energy: -8277.0 ( -30.54 by residue)
QMean score : 0.400
|
|
|