Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTA--YRDWKYQINYDLSRN-----------VGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLE-KATSSKWVTALERNLT-YDIADWVNDNVGTGIQASSVV-----GGMAFLSGSVFSENNN-DTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAER-------DREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 2ZFG Chain:A ((6-340)) | ----------------------------------------------------KDGNKVDLYGKAV-GLHYFSKG-GE-NSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGL-----KYADVGSFDYGRNYGVVYDALGYTDMLP-EF-GGDTAYSDD--FFVGRVGGVATYRNSNFFGLVDGLNF-AVQYLGKNERDTARRSNGDGVGGSISYEY-----EGFGIVGAYGAADRTNL-------QEA--------Q------------------PLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDF------------------G-----LRPSIAYTKSKAKDVEG-------IGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNK-LGVGSDDTVAVGIVYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 98798 for 2474 contacts (39.9/contact) +
2D Compatibility (PS) -31614 + (NN) -375 + (LL) 6636
1D Compatibility (HY) 400 + (ID) 2000
Total energy: 71845.0 ( 29.04 by residue)
QMean score : 0.107
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