Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITALPSADGQELTIQIQGRFDFGAHQDFR----DAYERVAITPRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS
1TID Chain:B ((17-102))
-------------LIVRLSGELDHHTAEELREQVTDVLENRAI--RHIVLNLGQLTFMDASGLGVILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSG---LFKI-
General information:
TITO was launched using:
RESULT:
Template:
1TID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76583 for 551 contacts (-139.0/contact) +
2D Compatibility (PS) -8633 + (NN) -2923 + (LL) 1120
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -97519.0 ( -176.99 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1TID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TID-query.scw
PDB file :
Tito_Scwrl_1TID.pdb
: