Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
4O6S Chain:A ((2-183))
-SISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSATLWGKLDSIALGDTLTGGA---GYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4O6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114026 for 1483 contacts (-76.9/contact) +
2D Compatibility (PS) -19712 + (NN) -14728 + (LL) 2096
1D Compatibility (HY) -21200 + (ID) 8900
Total energy: -176470.0 ( -119.00 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_4O6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O6S-query.scw
PDB file :
Tito_Scwrl_4O6S.pdb
: