Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIPHDL---------------LEADTLNNLLEDFVT----REGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
1EFY Chain:A ((78-153))
-LIPHDFGMKKPPLLSNLEYIQAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIK------VVDKDSEEAKII------------
General information:
TITO was launched using:
RESULT:
Template:
1EFY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1032 for 206 contacts (-5.0/contact) +
2D Compatibility (PS) -5955 + (NN) -3445 + (LL) 1808
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -14424.0 ( -70.02 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1EFY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EFY-query.scw
PDB file :
Tito_Scwrl_1EFY.pdb
: