Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQPVPPAPAG |
| 3TVK Chain:A ((5-164)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYL-ASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHI--NITVTAGVSRAFP---EEPLDVVIGRADRAMYEGKQTGRNRCMFIDE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84085 for 1248 contacts (-67.4/contact) +
2D Compatibility (PS) -17711 + (NN) -10121 + (LL) 12968
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -113749.0 ( -91.15 by residue)
QMean score : 0.573
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