Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRLSSAWHHLYDLCPELLKIDPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYCWLLQSPFGAKVTDEHLEVLMDASAARWTVDDTSANRGILLASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPNWTFAYCAVPDPRLREFPGWKPLPARGSLVG |
| 4CKE Chain:A ((197-266)) | --------------------PRDNETVPYDELIKELTTLSRHIFMASPENVILSPP-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6532 for 138 contacts (-47.3/contact) +
2D Compatibility (PS) -3718 + (NN) -1443 + (LL) 9412
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -4081.0 ( -29.57 by residue)
QMean score : 0.547
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