Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4EK2 Chain:A ((5-145))
MALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNVYSR--
General information:
TITO was launched using:
RESULT:
Template:
4EK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46404 for 1095 contacts (-42.4/contact) +
2D Compatibility (PS) -14761 + (NN) -2068 + (LL) 304
1D Compatibility (HY) -16000 + (ID) 5000
Total energy: -83929.0 ( -76.65 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4EK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EK2-query.scw
PDB file :
Tito_Scwrl_4EK2.pdb
: