Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGG--WVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL
4FTW Chain:A ((64-266))
----------EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRACGFGFQWFPIPWLD----GSSETAAAEGMAAAARDLDAFHDERLAEEGLPPEALALVGFSQGTMMALHVAPRR-AEEIAGIVGFSGRLLAPERLAEEARSK-PPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKERL
General information:
TITO was launched using:
RESULT:
Template:
4FTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129704 for 1669 contacts (-77.7/contact) +
2D Compatibility (PS) -21326 + (NN) -8078 + (LL) 1476
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -170232.0 ( -102.00 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_4FTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTW-query.scw
PDB file :
Tito_Scwrl_4FTW.pdb
: