Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNAMQVLRTWAARGVQWVGVAGVIGLSGAAQAGDYDGSPQVAEFVSEMTRDYGFAGEQLMGLFRDVNRKQSILDAISRPAERVKQ-----WKEYRPIFISDARISRGVDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGRNTGSYRVMDALSTLGFDYPPRADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSDPTDAIGSVASYFKQHGWVTGEPVVSVAEINDESAESAVTRGVDPTMSLGELRARGWRTHDALRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIARARGAH
1LTM Chain:A ((11-318))---------------------------------GDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDN-------GPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLW-DPVDAIGSVANYFKAHGWVKGDQVAVMA----NGQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALAR---


General information:
TITO was launched using:
RESULT:

Template: 1LTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190811 for 2469 contacts (-77.3/contact) +
2D Compatibility (PS) -31612 + (NN) -14250 + (LL) 3684
1D Compatibility (HY) -30000 + (ID) 7150
Total energy: -270139.0 ( -109.41 by residue)
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_1LTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LTM-query.scw
PDB file : Tito_Scwrl_1LTM.pdb: