Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLVLAVQMSGCATVRTLDAAKPGAPVVYAGTRLDWYSLHGGCCPMERFGAEAPAHPGLDLPGSALLDTLLLPFSLATAIGLNLGVSGGM
2IJR Chain:A ((42-68))
------RLFLAGCAGILKPVKC--MEYPPFPRLVS--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3039 for 111 contacts (-27.4/contact) +
2D Compatibility (PS) -2474 + (NN) -61 + (LL) 3064
1D Compatibility (HY) -800 + (ID) 200
Total energy: -3510.0 ( -31.62 by residue)
QMean score : -0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2IJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IJR-query.scw
PDB file :
Tito_Scwrl_2IJR.pdb
: