Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
3WGU Chain:G ((22-47))
-DYETVRNGGLIFAALAFIVGLIIILS-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6811 for 98 contacts (-69.5/contact) +
2D Compatibility (PS) -2766 + (NN) -3098 + (LL) 2472
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -11553.0 ( -117.89 by residue)
QMean score : -0.039
(partial model without unconserved sides chains):
PDB file :
Tito_3WGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WGU-query.scw
PDB file :
Tito_Scwrl_3WGU.pdb
: