Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEK--IDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELM------ADTRGES----LRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVN---QAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 4GF7 Chain:A ((16-372)) | ---------VAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDV----------LQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAAD---PVGRLTLQTGEVLEADLIVGADGVGSKVRD---SIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP----RVQRILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYET--TKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE----EGSSVEDALVAWETRIRPITDRCQAL-SGDYAANRSLS-------------KGNMFTPAALEAAR-YDPLR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105414 for 2976 contacts (-35.4/contact) +
2D Compatibility (PS) -35715 + (NN) -3263 + (LL) 3368
1D Compatibility (HY) -13600 + (ID) 4800
Total energy: -159424.0 ( -53.57 by residue)
QMean score : 0.314
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