Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQ-AVGSIPPHSVLVFDVELLEIL |
3UF8 Chain:A ((99-209)) | ------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59578 for 810 contacts (-73.6/contact) +
2D Compatibility (PS) -11397 + (NN) -918 + (LL) 6760
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -74133.0 ( -91.52 by residue)
QMean score : 0.529
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